From angstroms to ecosystems and entropy

By: James V. Kohl | Published on: February 24, 2016

Text with these references to follow. The two submissions should be available within the month. I will announce the availability and add the text with links to the citations at that time.
From hydrogen-atom transfer in DNA base pairs to ecosystems
[1] Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system
[2] Ultraviolet Absorption Induces Hydrogen-Atom Transfer in G⋅C Watson–Crick DNA Base Pairs in Solution.
[3] Photonic Maxwell’s Demon
[4] Common origins of RNA, protein and lipid precursors in a cyanosulfidic protometabolism
[5] Observation of Gravitational Waves from a Binary Black Hole Merger
[6] Re-criticizing RNA-mediated cell evolution: a radical perspective
[7] From Fertilization to Adult Sexual Behavior
[8] Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing
[9] Long non-coding RNAs in innate and adaptive immunity
[10]Defective control of pre–messenger RNA splicing in human disease
[11] What is Life?
[12] Conditional iron and pH-dependent activity of a non-enzymatic glycolysis and pentose phosphate pathway
[13]Structural diversity of supercoiled DNA
[14] Metabolic Reprogramming with a Long Noncoding RNA
[15] New insights into the hormonal and behavioural correlates of polymorphism in white-throated sparrows, Zonotrichia albicollis
[16] The metabolic background is a global player in Saccharomyces gene expression epistasis
[17]Dynamics of epigenetic regulation at the single-cell level
[18] A new view of transcriptome complexity and regulation through the lens of local splicing variations
[19] Pan-neuronal imaging in roaming Caenorhabditis elegans
[20] Distinct Circuits for the Formation and Retrieval of an Imprinted Olfactory Memory
[21] System-wide Rewiring Underlies Behavioral Differences in Predatory and Bacterial-Feeding Nematodes
[22] Nutrient-dependent/pheromone-controlled adaptive evolution: a model
[23] Role of olfaction in Octopus vulgaris reproduction
[24] Cytogenetic approaches for determining ecological stress in aquatic and terrestrial biosystems
[25] Mitochondrial functions modulate neuroendocrine, metabolic, inflammatory, and transcriptional responses to acute psychological stress
[26] Distinct E-cadherin-based complexes regulate cell behaviour through miRNA processing or Src and p120 catenin activity https://dx.doi.org/10.1038/ncb3227
[27]Oppositional COMT Val158Met effects on resting state functional connectivity in adolescents and adults
RNA-mediated molecular epigenetics and virus-driven entropy
[1] The phylogenetic utility and functional constraint of microRNA flanking sequences
[2] Structural diversity of supercoiled DNA
[3] UV-Induced Charge Transfer States in DNA Promote Sequence Selective Self-Repair
[4] Phosphorylation-Mediated Regulation of Alternative Splicing in Cancer
[5] An Epigenetic Signature for Monoallelic Olfactory Receptor Expression
[6] Cyanobacteria use micro-optics to sense light direction
[7] Cryo-EM reveals a novel octameric integrase structure for betaretroviral intasome function https://dx.doi.org/10.1038/nature16955
[8] Substitutions Near the Receptor Binding Site Determine Major Antigenic Change During Influenza Virus Evolution
[9] RNA-Mediated Regulation of HMGA1 Function
[10] An expanded sequence context model broadly explains variability in polymorphism levels across the human genome
[11] The Bull Sperm MicroRNAome and the Effect of Fescue Toxicosis on Sperm MicroRNA Expression
[12] miR-30e controls DNA damage-induced stress responses by modulating expression of the CDK inhibitor p21WAF1/CIP1 and caspase-3
[13] Redefining part of 300 year-old classification system for grouping members of the animal kingdom
[14] Systematic microRNAome profiling reveals the roles of microRNAs in milk protein metabolism and quality: insights on low-quality forage utilization
[15] Human milk miRNAs primarily originate from the mammary gland resulting in unique miRNA profiles of fractionated milk
[16] Neuroscience of Early-Life Learning in C. elegans
[17] Differential Odour Coding of Isotopomers in the Honeybee Brain
[18] Breast Milk Sugars Support Infant Gut Health
[19] C. elegans lifespan extension by osmotic stress requires FUdR, base excision repair, FOXO, and sirtuins


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