transcription factors

Codon optimality vs systemic fraud (6)

Re: Analysis of mRNA Dynamics Using RNA Sequencing Data 7/2/22 Excerpt 1) The RNA abundance of each gene is determined by its rates of transcription and RNA decay. Excerpt 2) Estimating differential transcription and decay rates of RNA molecules would enable the identification of regulatory factors, such as transcription factors, RNA binding proteins, and microRNAs, Codon optimality vs systemic fraud (6)

Patented Creation vs Evolution of Disease (1)

See: Learning from Bacteria about Natural Information Processing  10/15/09 The author of this monograph, Eshel Ben-Jacob was a biophysicist who modeled cognition using bacterial organization. That concept was extended to answer the question “What is Life?” in the context of Panksepp’s decoding of primal affective experiences. Indeed, in the case of higher animals we know Patented Creation vs Evolution of Disease (1)

Autophagy in health and disease (1)

Novel Treatment Strategies for the Nervous System: Circadian Clock Genes, Non-coding RNAs, and Forkhead Transcription Factors Each of these pathways have an intimate relationship with the programmed death pathways of autophagy and apoptosis and share a common link to the silent mating type information regulation 2 homolog 1 (Saccharomyces cerevisiae) (SIRT1) and the mechanistic target Autophagy in health and disease (1)

RNA-mediated adult learning, memory, and neurogenesis

Here is a way to assess the power of the media-industrial complex to suppress accurate representations of biophysically constrained biologically-based cause and effect. Wait to see whether this experimental evidence is reported in the science news, or how it is reported. Enriched Environment Increases PCNA and PARP1 Levels in Octopus vulgaris Central Nervous System: First RNA-mediated adult learning, memory, and neurogenesis

Dobzhansky 1973 and precision medicine (4)

See: Dobzhansky 1973 and precision medicine (3) Evidence-based medicine has been hijacked: a report to David Sackett Fake news See for comparison: Sugar Gliders, Flying Squirrels, and How Evolutionists Explain Away Uncooperative Data …contradictory evidence drives evolutionists to embrace irrational just-so stories. Natural selection cannot “adapt” anything. Natural selection kills off the bad designs. It Dobzhansky 1973 and precision medicine (4)

Energy-dependent chirality (2)

See Energy-dependent chirality 2013 MicroRNA-based regulation of epithelial–hybrid–mesenchymal fate determination See also E. Ben-Jacob Ben-Jacob et al., have linked everything currently known about natural information processing from natural selection for energy-dependent codon optimality to healthy longevity and from virus-driven energy theft to mutations that cause cancer. See for comparison: LH Tsai Tsai laboratory Our primary Energy-dependent chirality (2)

Did evolution autophosphorylate your kinases? (3)

Did evolution autophosphorylate your kinases? (1) Did evolution autophosphorylate your kinases? (2) See also: N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection Reported as: Chemical tags affect ability of RNA viruses to infect cells Dynamics of Human and Viral RNA Methylation during Zika Virus Infection Reported as:  Zika virus infection alters human and viral RNA Did evolution autophosphorylate your kinases? (3)

A working model of “captured” genes

Genetic Evidence That Captured Retroviral Envelope syncytins Contribute to Myoblast Fusion and Muscle Sexual Dimorphism in Mice Conclusion: … we propose as a working model that syncytins have been captured primarily as a placental gene, but that some expression in the muscle is taking place (possibly as a consequence of regulatory processes and transcription factors A working model of “captured” genes

RNA methylation (2)

Conditioning as an adjunct in the pharmacotherapy of lupus erythematosus Several studies have provided evidence suggesting that “placebo effects” represent conditioning phenomena and that learning processes influence the response to placebo medication. This case report describes an adolescent with severe lupus erythematosus who received cyclophosphamide (CY) paired with taste (cod liver oil) and smell (rose RNA methylation (2)

RNA-mediated DNA modifications

A new way to discover DNA modifications Excerpt: Using their approach, which combines bioanalytical chemistry, comparative genomics, and a special type of DNA sequencing, the team has discovered a DNA modification that helps bacteria to protect their genomes from viral infection. My comment: There is one way to link nutrient-dependent microRNA flanking sequences from adhesion RNA-mediated DNA modifications