pH-dependent viral latency (1)
(click to enlarge)
See also: Unified rational protein engineering with sequence-based deep representation learning 10/21/19
Rational protein engineering requires a holistic understanding of protein function. Here, we apply deep learning to unlabeled amino-acid sequences to distill the fundamental features of a protein into a statistical representation that is semantically rich and structurally, evolutionarily and biophysically grounded.
Energy-dependent biophysical constraints comparisons between the hecatombic evolution of pathology and the polycombic ecological adaptations that link the patent for naturally occurring light-activated RNA interference.
See: RNA-Guided Human Genome Engineering (2015)
5. Repetitive elements or endogenous viral elements can be targeted with engineered Cas+gRNA systems in microbes, plants, animals, or human cells to reduce deleterious transposition or to aid in sequencing or other analytic genomic/transcriptomic/proteomic/diagnostic tools (in which nearly identical copies can be problematic).
Link biophysically constrained RNA interference to the prevention of all virus-driven pathology via quantum biology.
See: Photoactivated biological processes as quantum measurements (2015)
We outline a framework for describing photoactivated biological reactions as generalized quantum measurements of external fields, for which the biological system takes on the role of a quantum meter.
Using coherence to enhance function in chemical and biophysical systems (2017)
Here we survey the state of recent discoveries, present viewpoints that suggest that coherence can be used in complex chemical systems, and discuss the role of coherence as a design element in realizing function.
Molecular Mechanics Simulations and Improved Tight-Binding Hamiltonians for Artificial Light Harvesting Systems: Predicting Geometric Distributions, Disorder, and Spectroscopy of Chromophores in a Protein Environment (2018)
We present molecular mechanics and spectroscopic calculations on prototype artificial light harvesting systems consisting of chromophores attached to a tobacco mosaic virus (TMV) protein scaffold.
Modern Approaches to Exact Diagonalization and Selected Configuration Interaction with the Adaptive Sampling CI Method (2020)
The largest of these calculations is Si2H6 which is a simulation of 34 electrons in 152 orbitals. We also present some preliminary results for fast deterministic perturbation theory simulations…
For comparison, see: Mutation-driven evolution (6/14/13) and ask a theorist how the mutations are biophysically constrained to prevent the virus-driven degradation of messenger RNA that serious scientists have linked to all virus-driven pathology across kingdoms.
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2 MIN READ
0
Light-activated carbon fixation did not evolve (4)
7 MIN READ
0
How to biophysically constrain the flu virus (1)
4 MIN READ
0
Cryo-EM: Linking spatial and conformational constraints
9 MIN READ
0
A reversible TCA cycle in a thermophile (3)
4 MIN READ
0
A reversible TCA cycle in a thermophile
5 MIN READ
0
A mental health problem at the highest level (3)
7 MIN READ
0
Diet-driven RNA interference and mental health (3)
4 MIN READ
0
Anti-entropic sunlight: Schrödinger’s Creationist Secret? (3)
6 MIN READ
1
Anti-entropic sunlight: Schrödinger’s Creationist Secret? (2)
4 MIN READ
0
BiondVax Universal Flu Vaccine Patent
4 MIN READ
0
The MicroRNAome Strikes Back: A Sokalian hoax (5)
6 MIN READ
0
The MicroRNAome Strikes Back: A Sokalian hoax (3)
4 MIN READ
0
The MicroRNAome Strikes Back: A Sokalian hoax (2)
6 MIN READ
0
A mental health problem at the highest level (2)
3 MIN READ
0
Diet-driven RNA interference and cancer prevention (4)
4 MIN READ
0
Diet-driven RNA interference and cancer prevention (3)
6 MIN READ
0
Enzyme-constrained interethnic diversity (8)
< 1 MIN READ
0
Enzyme-constrained interethnic diversity (7)
6 MIN READ
0
Enzyme-constrained interethnic biodiversity (3)
3 MIN READ
0
Enzyme-constrained interethnic biodiversity (1)
5 MIN READ
0
A Mathematical Model Links Quantum Physics to Quantum Souls (2)
4 MIN READ
0
The “walking fish” walks straight from quantum physics to quantum souls (4)
11 MIN READ
0
The “walking fish” walks straight from quantum physics to quantum souls (2)
3 MIN READ
0
A Mathematical Model Links Quantum Physics to Quantum Souls (1)
6 MIN READ
0
From base editing to RNA editing (6)
8 MIN READ
0
Kinetically Stable Thermodynamically Activated Cell Metabolism (7)
4 MIN READ
0
Darwinian adaptation: a clear evolutionary trail?
4 MIN READ
0
Agilent technology and energy-dependent autophagy
8 MIN READ
0
Narcissistic egomaniacal and deadly denial of autophagy
6 MIN READ
0
The overwhelming ignorance of sex researchers (2)
4 MIN READ
0
Energy-dependent base editing and correction of mutations (2)
9 MIN READ
0
Trashing the 2nd Law
7 MIN READ
0
The overwhelming ignorance of sex researchers
5 MIN READ
0
Two retractions of human idiocy
2 MIN READ
0
Reporting new scientific truths is not allowed in the USA
3 MIN READ
0
MicroRNAs and the Cassandra syndrome (revisited)
4 MIN READ
0
A null mutation and healthy longevity?
4 MIN READ
0
Light-activated error free DNA repair
5 MIN READ
0
Achromobacter and killer theories
2 MIN READ
0
Eutrophication and phosphorylated biodiversity
6 MIN READ
0
Alternative splicing: a new therapy?
3 MIN READ
0
From base editing to RNA editing (4)
5 MIN READ
0
The next reformation: 500 years too late? (1)
< 1 MIN READ
0
The next reformation: 500 years too late? (2)
2 MIN READ
0
Energy as information and Infowars
5 MIN READ
0
From base editing to RNA editing (2)
7 MIN READ
0
Cryo-EM: More than a suggestion
< 1 MIN READ
0
Exome Sequencing Impact in Routine Care
4 MIN READ
0
Virulence: Out of stock
2 MIN READ
0
Energy-dependent structure and function: Until death (5)
4 MIN READ
0
Until death: Virus-driven failure of multisensory integration (2)
6 MIN READ
0
Predicting who wins the 2017 Nobel Prizes (7)
4 MIN READ
0
Entertaining yourself to death
6 MIN READ
0
Criticisms of a validated model
9 MIN READ
0
Thanks again for asking about DNA methylation
4 MIN READ
0
Predicting who wins the 2017 Nobel Prizes (2)
4 MIN READ
0
1996-2016: Ignoring alternative splicings of pre-mRNA
7 MIN READ
0
Life and death via chemical effects on photosynthesis
8 MIN READ
0
Dispelling the ignorance of theorists
4 MIN READ
0
Sci-Hub vs limits on the dissemination of information
6 MIN READ
0
Evolutionary theories of epigenetic drift
2 MIN READ
0
A fear of pheromones (revisited)
6 MIN READ
0
Host-derived creation of all pathology (2 of 2)
9 MIN READ
0
God vs host-derived creation of virus-driven pathology (2)
4 MIN READ
0
God vs host-derived creation of virus-driven pathology
6 MIN READ
0
Pseudoscientists hate what science explains! (3)
4 MIN READ
0
Pseudoscientists hate what science explains!
3 MIN READ
0
Your indifference is killing you and others (4)
4 MIN READ
0
Robert Sapolsky’s legacy of atheistic pseudoscientific nonsense
4 MIN READ
0
Solar analemma with a total solar eclipse
2 MIN READ
0
The Origin of Information (4)
4 MIN READ
0
Energy-dependent physical and biophysical constraints (10)
8 MIN READ
0
Energy-dependent physical and biophysical constraints (5)
7 MIN READ
0
Energy-dependent physical and biophysical constraints (3)
2 MIN READ
0
The emergence of light as energy from a life-giving star (2)
2 MIN READ
0
Milk-derived miRNAs, circulating microRNAs, DNA repair, and embryonic viability
2 MIN READ
0
God’s shrinking role in salvation (2)
5 MIN READ
0
Food energy-dependent cell type differentiation (2)
10 MIN READ
0
Hard Science vs the neo-Darwinian “magic box”
9 MIN READ
0
MicroRNAs light up life
7 MIN READ
0
From E. coli to monkeys and mankind: Theories vs models (5)
5 MIN READ
0
From E. coli to monkeys and mankind: Theories vs models (2)
6 MIN READ
0
Food energy-dependent epigenetic adaptation (2)
< 1 MIN READ
0
Food energy-dependent epigenetic adaptation
11 MIN READ
0
Energy-dependent epigenetic translation to mRNA stability (6)
8 MIN READ
0
Energy-dependent epigenetic translation to mRNA stability (2)
5 MIN READ
0
Nothing evolved into all biodiversity on Earth
4 MIN READ
0
Energy as information and constrained endogenous RNA interference (4)
7 MIN READ
0
What energy source do proteins prefer?
6 MIN READ
0
Draining the academic swamp of parasites
3 MIN READ
0
The death of human ethology via ecology
7 MIN READ
0
The Virus-Driven Suicide March for Science
5 MIN READ
0
Open Science: Closed to facts about microRNAs
6 MIN READ
0
Viruses in pathogenic variants disrupt alternative splicings (2)
3 MIN READ
0
Respiration-dependent endogenous RNA interference
4 MIN READ
0
Sal Giardina: apologetics revisited
8 MIN READ
0
Life in your UV light-constrained galaxy
5 MIN READ
0
Food for thought: Penrose v Ellis (3)
4 MIN READ
0
Thinking about energy is not radical re-thinking
6 MIN READ
0
Magnussen’s “Faith fools” keep the faith
3 MIN READ
0
Proof: Sunlight is energy as information
< 1 MIN READ
0
The essence of precision medicine: drug targets or healthy longevity?
4 MIN READ
0
The essence of precision medicine
4 MIN READ
0
Allen Institute confirms food energy is information
6 MIN READ
0
RNA-mediated adult learning, memory, and neurogenesis
3 MIN READ
0
Theistic evolutionists fight back and lose (3)
4 MIN READ
0
Theistic evolutionists fight back and lose (2)
4 MIN READ
0
Theistic evolutionists fight back and lose
4 MIN READ
0
Bill Gates refutes theistic evolution (sequel)
8 MIN READ
0
Bill Gates refutes theistic evolution
4 MIN READ
0
Emily Witkin refutes theistic evolution
2 MIN READ
0
RNA editing refutes theistic evolution
4 MIN READ
0
Pseudoscientists fail to refute theistic evolution
4 MIN READ
0
Stuart Kauffman refutes theistic evolution
3 MIN READ
0
May the anti-entropic force of sunlight be with you
4 MIN READ
0
Happy Darwin Day (2017)
4 MIN READ
0
George Church refutes theistic evolution (2)
2 MIN READ
0
George Church refutes theistic evolution
5 MIN READ
0
Physicists: Desperate Acts (revisited)
6 MIN READ
0
Energy as information and constrained endogenous RNA interference (3)
4 MIN READ
0
Energy as information and constrained endogenous RNA interference (2)
2 MIN READ
0
Dobzhansky 1973 and precision medicine (5)
3 MIN READ
0
Atomic theory vs facts about hydrogen-atom transfer
4 MIN READ
0
Dobzhansky 1973 and Precision Medicine (2)
5 MIN READ
0
Anti-entropic energy and the “Music of Life”
3 MIN READ
0
Anti-entropic energy and the "Music of Life"
3 MIN READ
0
Energy-dependent hydrogen bonds in supercoiled DNA
7 MIN READ
0
Energy-dependent chirality
6 MIN READ
0
Vietnam Veterans and others with glioblastoma
3 MIN READ
0
Energy-dependent sensory maps (1996-2016)
5 MIN READ
0
Energy-dependent alternative splicings 1996 – 2016
12 MIN READ
0
Energy-dependent oscillating gene networks organize life
4 MIN READ
0
Re-inventing mutation-driven evolution (2)
4 MIN READ
0
Bio-functional information
3 MIN READ
0
Autophagy is the antiphage defense strategy
3 MIN READ
0
Tasting light links energy from creation to adaptation
9 MIN READ
0
Politicized science: The demise of RNA-mediated.com?
3 MIN READ
0
Metabolic Phenotyping Research
2 MIN READ
0
Phylogenetic similarity sans energy
2 MIN READ
0
Energy-dependent coulombic, autophagic, polycombic healthy longevity
4 MIN READ
0
Light, behavior and autophagy, a gender-specific risk factor
4 MIN READ
0
Energy-dependent purifying selection / autophagy (3)
2 MIN READ
0
Energy-dependent purifying selection / autophagy
2 MIN READ
0
Base pairs, amino acids and phenotypes
10 MIN READ
0
Epigenetically effected energy-dependent fluorescence (2)
6 MIN READ
0
Epigenetically effected energy-dependent fluorescence
5 MIN READ
0
From Precis to Proof in 6000 years
9 MIN READ
0
Polycombic ecological adaptation as a science, not a theory (2)
12 MIN READ
0
Polycombic ecological adaptation as a science, not a theory
3 MIN READ
0
Biological evolution as a philosophy, not a science
6 MIN READ
0
Attacking Young Earth Creationists
5 MIN READ
0
Olfactory receptor pseudo-pseudogenes
2 MIN READ
0
80 years of causal analysis (1936 – 2016)
11 MIN READ
0
Did evolution autophosphorylate your kinases? (3)
2 MIN READ
1
The human virome (revisited)
4 MIN READ
0
The natural success of RNAi and failed treatment
7 MIN READ
0
Pheromone-controlled autophagy
4 MIN READ
0
Hecatombic evolution VS polycombic ecological adaptation
3 MIN READ
0
Virus-mediated hecatombic evolution
2 MIN READ
0
Hecatombic evolution via oncocers and oncohistones
9 MIN READ
0
Did evolution autophosphorylate your kinases? (2)
5 MIN READ
1
Did evolution autophosphorylate your kinases?
5 MIN READ
1
Life is energy-dependent task management
3 MIN READ
0
Hydrogen-atom energy in DNA base pairs
6 MIN READ
0
Light energy-induced base pair changes (2)
4 MIN READ
0
Light energy-induced base pair changes (1)
6 MIN READ
0
How did the innate immune system evolve?
4 MIN READ
0
The Aquatic Ape: New evidence?
4 MIN READ
0
Protecting 4 billion people from virus-driven entropy
< 1 MIN READ
0
Lawless evolution: No physics
4 MIN READ
0
Conserved biophotonic emissions
7 MIN READ
2
Antithetical conclusions (7)
3 MIN READ
0
RNAi: From magic bullet to billion dollar baby
4 MIN READ
0
GC-rich neo-Darwinian train wreck
5 MIN READ
0
From angstroms to ecosystems
7 MIN READ
0
Food supplement or licensed immunostimulant?
6 MIN READ
0
The end of neo-Darwinism
5 MIN READ
0
Biophotonics, glycobiology, quantized biodiversity
4 MIN READ
0
The tipping point? 50,000 publications (5)
3 MIN READ
0
Did “Nature” kill Steve Jobs? (3)
10 MIN READ
0
Did “Nature” kill Steve Jobs? (2)
6 MIN READ
0
Did “Nature” kill Steve Jobs?
3 MIN READ
0
Placing boundaries where none exist
< 1 MIN READ
0
Innate immunity and multiplexing
7 MIN READ
0
RNA methylation (2)
7 MIN READ
0
Masters of deception about nature (2)
7 MIN READ
0
Cracking the Olfactory Code?
5 MIN READ
0
Energy-dependent RNA methylation (9)
2 MIN READ
0
Energy-dependent RNA methylation (10)
4 MIN READ
0
Energy-dependent RNA methylation (8)
4 MIN READ
0
Energy-dependent RNA methylation (7)
7 MIN READ
0
Energy-dependent RNA methylation (6)
9 MIN READ
0
Energy-dependent RNA methylation (5)
3 MIN READ
0
The tipping point? 50, 000 publications (2)
2 MIN READ
0
Energy-dependent creation and entropy
4 MIN READ
0
RNA-mediated physics, chemistry, and molecular epigenetics (3)
5 MIN READ
0
RNA-mediated physics, chemistry, and molecular epigenetics (2)
7 MIN READ
0
Wasted Templeton Funding (3)
2 MIN READ
0
Ignore the evidence: Rachel Feltman
5 MIN READ
0
Energy-dependent RNA-mediated immunity (1)
10 MIN READ
0
Science vs semantics
4 MIN READ
0
From angstroms to ecosystems and entropy
2 MIN READ
0
Hydrogen-atom transfer in DNA base pairs (7)
5 MIN READ
0
Bacteria see the light and they adapt
7 MIN READ
0
The Light and Darkness of “Evolution 2.0”
11 MIN READ
0
Ricki Lewis’ Time Machine
5 MIN READ
0
Virus-perturbed alternative splicings
3 MIN READ
0
Hydrogen-atom transfer in DNA base pairs (5)
10 MIN READ
0
Intelligent RNAs vs evolved genes
2 MIN READ
0
Finding peace and π in the light of H bond energy (2)
8 MIN READ
0
Epigenetic (re)programming of behavior (2)
6 MIN READ
0
Researchers rename, reshuffle, and reveal their ignorance
3 MIN READ
0
Hydrogen-Atom Transfer in DNA Base Pairs (3)
3 MIN READ
0
Hydrogen-Atom Transfer in DNA Base Pairs (2)
< 1 MIN READ
0
RNA-mediated theory killers (2)
8 MIN READ
0
Teaching the biologically uninformed
3 MIN READ
0
Hydrogen-Atom Transfer in DNA Base Pairs
9 MIN READ
0
Let there be anti-entropic light (3)
6 MIN READ
0
Neuroplasticity
4 MIN READ
0
Cyclic cosmology and the stability of organized genomes
4 MIN READ
0
RNA central and RNA-mediated.com
6 MIN READ
0
Natural selection: an anti-entropic force?
2 MIN READ
0
“New” quantum biology. Pirating the old
3 MIN READ
0
Creating genes and species
3 MIN READ
0
Is life the balance between quantum and classical physics?
3 MIN READ
0
Physics, chemistry, light, and life
2 MIN READ
0
pH, water, amino acids and protein folding
4 MIN READ
0
Anti-entropic solar energy
5 MIN READ
0
RNA directed DNA methylation and cell types
4 MIN READ
0
Atheism: Arrogant, useless, and divisive ignorance
7 MIN READ
0
Quantum physics, quantum biology, and quantum consciousness
4 MIN READ
0
Quantum Superpositions: let there be light
4 MIN READ
0
The future of physics predicts no future for evolutionary theory
3 MIN READ
0
Glycine and GnRH: Am I being pedantic?
4 MIN READ
0
Eliminating correlations from evolutionary ecology
6 MIN READ
0
Achiral GnRH: no prophesy, just prediction
9 MIN READ
0
RNA-mediated events: chromosomal rearrangements and genomic rearrangements
2 MIN READ
2
Forces of "Nature" limit dissemination of information
4 MIN READ
0
Evolving DNA before RNA
4 MIN READ
0
Quantum physics meets Evolutionary Psychology News
2 MIN READ
0
The quantum biology of consciousness
3 MIN READ
0
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